FAQ¶
Do I need CoolBox?¶
No. PlotNado is independent.
Can I use DataFrames instead of files?¶
Yes. Signal and interval-style tracks support in-memory tabular inputs where applicable.
How do I discover all options for a track?¶
from plotnado import GenomicFigure
GenomicFigure.track_options("bigwig")
GenomicFigure.track_options_markdown("bigwig")
or CLI:
plotnado track-options bigwig
How should I scale overlays?¶
Treat the overlay as the unit of scaling:
- Use
autoscale_groupon the overlay track when it should match neighboring signal panels. - Use overlay
min_value/max_valueonly when you want to pin that edge deliberately. - Use separate panels instead of an overlay when the signals need independent ranges.
What is the recommended coding style?¶
Use a single GenomicFigure instance (gf) and chain helper methods. See Track Construction.
How do I share figure definitions?¶
gf.to_toml("plot.toml")
loaded = GenomicFigure.from_toml("plot.toml")