Examples

TrackNado provides several examples demonstrating how to use the library for different scenarios.

1. CapCruncher Hub Generation

Replicates the complex logic of a legacy pipeline for capturing-based 3C data. View Source Code

2. Seqnado Workflow

Integration with Snakemake and the seqnado directory structure. View Source Code

3. Complex Edge Cases

Demonstrates merging multiple hubs, handling mixed file types, and reconciling different grouping strategies. View Source Code

4. Simple Refactored Workflow

A clean example of the new fluent API. View Source Code